3.3.3.20. NXapm_paraprobe_ranger_results

Status:

application definition (contribution), extends NXapm_paraprobe_tool_results

Description:

Application definition for results files of the paraprobe-ranger tool. ...

Application definition for results files of the paraprobe-ranger tool.

The tool paraprobe-ranger evaluates how mass-to-charge-state-ratio values map on (molecular) ion types.

Symbols:

The symbols used in the schema to specify e.g. dimensions of arrays.

n_ions: The total number of ions in the reconstructed volume.

Groups cited:

NXapm_paraprobe_tool_process, NXentry

Structure:

ENTRY: (required) NXentry

definition: (required) NX_CHAR

Obligatory value: NXapm_paraprobe_ranger_results

iontypesID: (required) NXapm_paraprobe_tool_process

The tool loads ranging definitions from the configuration file and ...

The tool loads ranging definitions from the configuration file and evaluates for each ion to which iontype it matches. If an ion matches on no type, the ion is assume of the default unknown_type. In this case, the value iontypes is 0. In other cases the value is larger than 0.

iontypes: (required) NX_UINT (Rank: 1, Dimensions: [n_ions]) {units=NX_UNITLESS}

The iontype (identifier) for each ion that was best matching, ...

The iontype (identifier) for each ion that was best matching, stored in the order of the evaporation sequence ID.

Hypertext Anchors

List of hypertext anchors for all groups, fields, attributes, and links defined in this class.

NXDL Source:

https://github.com/nexusformat/definitions/blob/main/contributed_definitions/NXapm_paraprobe_ranger_results.nxdl.xml